Metabolomic profiling of crayfish haemolymph distinguishes sister species and sex: Implications for conservation, aquaculture and physiological studies

Author Identifier

Emily D Lette
ORCID: 0000-0002-0462-8255

Document Type

Journal Article

Publication Title

Freshwater Crayfish


International Association of Astacology


School of Science / Centre for Ecosystem Management




Duffy, R., Koenders, A., & Broadhurst, D. I. (2020). Metabolomic Profiling of Crayfish Haemolymph Distinguishes Sister Species and Sex: Implications for Conservation, Aquaculture and Physiological Studies. Freshwater Crayfish, 25(1). https://doi.org/10.5869/fc.2020.v25-1.089


Hairy marron, Cherax tenuimanus (Smith) are critically endangered freshwater crayfish found only in a single river in southwest Australia. Conservation efforts have included a captive breeding program, which has been largely unsuccessful, despite the closely related smooth marron, Cherax cainii Austin, being successfully bred for aquaculture. Using an untargeted liquid chromatography-mass spectrometry (LC-MS) metabolomic approach we created a profile of the metabolites in the haemolymph for males and females of the two species of marron. A non-lethal method was used to collect haemolymph and 84 reproducible annotated metabolites were identified. Variation in the levels of some metabolites were detected between species and between sexes within species. Multivariate analyses clearly differentiated the congeneric species and univariate analyses identified differences between species, sex, and for some metabolite interactions, between species and sex. This study created a baseline metabolome dataset for the two species and began to investigate the biological significance of metabolites that varied between species. We have shown metabolomics could be used for targeted studies to potentially assist reproductive success. This approach will be beneficial for conservation and aquaculture practices with potential applications for other aquatic taxa worldwide.



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