Small nucleolar RNA networks are up-regulated during human anaphylaxis

Document Type

Journal Article

Publication Title

Clinical & Experimental Allergy

Volume

51

Issue

10

First Page

1310

Last Page

1321

PubMed ID

34228845

Publisher

Wiley

School

School of Medical and Health Sciences

RAS ID

36297

Funders

Royal Perth Hospital Resaerch Foundation US Food Allergy and Anaphylaxis Network

Comments

McGrath, F. M., Francis, A., Fatovich, D. M., Macdonald, S. P. J., Arendts, G., Bosco, A., . . . Bosio, E. (2021). Small nucleolar RNA networks are up‐regulated during human anaphylaxis. Clinical & Experimental Allergy, 51(10), 1310-1321. https://doi.org/10.1111/cea.13982

Abstract

Background: Anaphylaxis is a severe, potentially life-threatening allergic reaction driven primarily by the activation of mast cells. We still fail to understand factors underlying reaction severity. Furthermore, there is currently no reliable diagnostic test to confirm anaphylaxis in the emergency department (ED). Objective: This study sought to explore gene expression changes associated with anaphylaxis severity in peripheral blood leucocytes and evaluate biomarker potential. Methods: Microarray analysis (total RNA) was performed using peripheral blood samples from ED patients with moderate (n = 6) or severe (n = 12) anaphylaxis and sepsis (n = 20) at presentation (T0) and one hour later (T1). Results were compared between groups and healthy controls (n = 10 and n = 11 matched to anaphylaxis and sepsis patients, respectively). Changes in gene expression were determined using R programming language, and pathway analysis applied to explore biological processes and pathways associated with genes. Differentially expressed genes were validated in an independent cohort of anaphylaxis (n = 30) and sepsis (n = 20) patients, and healthy controls (n = 10), using quantitative reverse transcription-polymerase chain reaction (qRT-PCR). Results: Significant up-regulation of small nucleolar RNAs (snoRNAs) was demonstrated in anaphylaxis compared to sepsis patients in the microarray cohort, at T0 and T1. qRT-PCR analysis of the validation cohort showed five genes: SNORD61, SNORD8, SNORD69, SNORD119 and HIST1H1D to be significantly up-regulated (adjusted p < 0.05) in severe anaphylaxis compared to sepsis. Seven genes (SNORD61, SNORD8, SCARNA21, SNORD69, SNORD110, SNORD119 and SNORD59A) were significantly up-regulated (adjusted p < 0.05) in severe anaphylaxis compared to healthy controls. Conclusion: This study demonstrates for the first time the unique involvement of snoRNAs in the pathogenesis of anaphylaxis and suggests they are not a general feature of systemic inflammation. Further investigation of snoRNA expression in anaphylaxis could provide insights into disease pathogenesis. Clinical relevance: SnoRNAs are up-regulated during acute anaphylaxis in humans and could potentially be used as biomarkers of severe anaphylaxis.

DOI

10.1111/cea.13982

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